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  5. Spa_g40192

Spa_g40192


Description : stromal sorting factor of thylakoid membrane SRP insertion system *(STIC2) & original description: none


Gene families : OG0004403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g40192

Target Alias Description ECC score Gene Family Method Actions
Dac_g11793 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Dcu_g21326 No alias stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Ehy_g10854 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Len_g22373 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Mp2g03740.1 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Nbi_g08626 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009199 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Solyc08g006780.3.1 Solyc08g006780 stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Solyc12g009980.2.1 Solyc12g009980 stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004401 YbaB/EbfC 126 211
No external refs found!