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  5. Spa_g40187

Spa_g40187 (PRA1.B1)


Aliases : PRA1.B1

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g40187

Target Alias Description ECC score Gene Family Method Actions
AT2G38360 PRA1.B4 prenylated RAB acceptor 1.B4 0.02 OrthoFinder output from all 47 species
AT5G05380 PRA1.B3 prenylated RAB acceptor 1.B3 0.03 OrthoFinder output from all 47 species
Adi_g086450 PRA1.B6 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12994 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00225 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01011 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.80 No alias No description available 0.03 OrthoFinder output from all 47 species
Ehy_g10702 PRA7, PRA1.F2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12734 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08254 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08496 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06102 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24043 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17272 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38221 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017592 PRA1.B3 B-G-class Rab-GDF protein & original description: CDS=1-558 0.04 OrthoFinder output from all 47 species
Sam_g52062 No alias B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Smo271785 PRA1.B2 Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Spa_g32605 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15611 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18034 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031897_P001 PRA1.B2, Zm00001e031897 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 38 178
No external refs found!