- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PRA1.B2
Description : B-G-class Rab-GDF protein & original description: none
Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00265420 | PRA1.F3, PRA8,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G07110 | PRA1.B6 | prenylated RAB acceptor 1.B6 | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g17771 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g13344 | PRA1.B2 | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g42675 | PRA1.E | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01011 | PRA1.B1 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene11341.t1 | PRA1.B5, Aspi01Gene11341 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene70815.t1 | PRA7, PRA1.F2,... | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G073700.1 | PRA1.B2, Ceric.15G073700 | B-G-class Rab-GDF protein & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G080600.1 | PRA1.B5, Ceric.29G080600 | B-G-class Rab-GDF protein & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g01610.1 | PRA1.B3, LOC_Os11g01610 | B-G-class Rab-GDF protein | 0.02 | OrthoFinder output from all 47 species | |
| Len_g00355 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g00455 | PRA1.B1 | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g12734 | PRA1.B4 | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06102 | PRA1.B1 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g23323 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04246 | PRA1.B4 | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0077.g017592 | PRA1.B3 | B-G-class Rab-GDF protein & original description: CDS=1-558 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g11811 | No alias | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004895 | Prenylated_rab_accept_PRA1 | 38 | 178 |
| No external refs found! |