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  5. Spa_g40016

Spa_g40016


Description : germ cell differentiation factor *(RKD) & original description: none


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g40016

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene27306.t1 Aspi01Gene27306 germ cell differentiation factor *(RKD) & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G065200.1 Ceric.04G065200 germ cell differentiation factor *(RKD) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.93 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g12117 No alias germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g17181 No alias RKD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05027 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016598 No alias germ cell differentiation factor *(RKD) & original... 0.03 OrthoFinder output from all 47 species
Spa_g23094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 359 406
No external refs found!