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  5. Spa_g39900

Spa_g39900 (ATPDR7, PDR7)


Aliases : ATPDR7, PDR7

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39900

Target Alias Description ECC score Gene Family Method Actions
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.03 OrthoFinder output from all 47 species
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.03 OrthoFinder output from all 47 species
AT3G30842 ATPDR10, PDR10 pleiotropic drug resistance 10 0.02 OrthoFinder output from all 47 species
Aob_g21905 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22353 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28059.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43685.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33192 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034745001 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_15493 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_33043 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Gb_34309 ATPDR3, PDR3 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_34606 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g42350.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10427561g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_117094g0010 ABCG40, PDR12,... no description available(sp|h6ws94|pdr1_pethy : 134.0) 0.04 OrthoFinder output from all 47 species
MA_12781g0010 ABCG40, PDR12,... ABC transporter G family member 31 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_2168g0010 PDR4, ATPDR4 ABC transporter G family member 44 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp2g21800.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g38848 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01506 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10465 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37196 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo133564 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo441717 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc01g101070.3.1 PIS1, ABCG37,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc05g053610.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc05g055330.3.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g098210.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Spa_g09122 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21976 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30595 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02910 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027850_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 536 747
IPR013581 PDR_assoc 752 813
IPR029481 ABC_trans_N 122 175
IPR043926 ABCG_dom 415 470
IPR043926 ABCG_dom 1094 1136
IPR003439 ABC_transporter-like_ATP-bd 913 1065
IPR003439 ABC_transporter-like_ATP-bd 200 382
No external refs found!