Spa_g39652

Description : not classified & original description: none

Gene families : OG0000474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000474_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g39652
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
Aev_g48430	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g14067	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g23277	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g39928	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02662.t1	Aspi01Gene02662	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g23785	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15997	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016835	HRT, RCY1, RPP8	not classified & original description: CDS=1-2136	0.03	OrthoFinder output from all 47 species
Tin_g31200	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:2001070	starch binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	294	545

External Links

No external refs found!