Spa_g39367 (IXR1, CEV1, CESA3,...)

Aliases : IXR1, CEV1, CESA3, ATCESA3, ATH-B

Description : catalytic component *(CesA) of cellulose synthase complex & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g39367

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00196920	CESA4, NWS2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
AMTR_s00137p00043990	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
AT5G17420	MUR10, ATCESA7,...	Cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
AT5G44030	CESA4, NWS2, IRX5	cellulose synthase A4	0.02	OrthoFinder output from all 47 species
Adi_g011565	IXR1, CEV1,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g014232	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Adi_g082474	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Adi_g082875	CESA5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g089068	IXR1, CEV1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g127602	MUR10, ATCESA7,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g13699	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ala_g14910	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ala_g17281	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g12758	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g23144	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g27117	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g40201	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g47693	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Als_g50501	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g51753	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aob_g06076	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aob_g28659	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aob_g30203	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aop_g11531	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g29939	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aop_g63761	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aspi01Gene23400.t2	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene45259.t1	ATCSLD2, CSLD2,...	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g04692	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dac_g01048	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g14092	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dac_g30499	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dac_g34792	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Dcu_g08978	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dde_g38793	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dde_g47289	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dde_g50099	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ehy_g06173	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g06186	CESA09, CESA9	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
GSVIVT01023837001	ATH-A, CESA2, ATCESA2	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01030467001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
GSVIVT01035830001	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
LOC_Os01g54620.1	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os03g59340.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os07g24190.1	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os07g36630.1	ATCSLD5, CSLD5,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g06380.1	ATCSLD2, CSLD2,...	mannan synthase (CSLD). D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
MA_102060g0010	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
MA_10434525g0010	ATH-A, CESA2, ATCESA2	Probable cellulose synthase A catalytic subunit 5...	0.02	OrthoFinder output from all 47 species
MA_10435322g0010	AtCESA1, RSW1, CESA1	Probable cellulose synthase A catalytic subunit 2...	0.02	OrthoFinder output from all 47 species
Mp7g07800.1	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Msp_g36063	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Msp_g43757	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Nbi_g27743	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g09621	MUR10, ATCESA7,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ore_g10476	MUR10, ATCESA7,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g36488	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Pnu_g13304	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Pnu_g15169	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19575	ATCSLD4, CSLD4	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g38934	No alias	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Sam_g43195	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc01g067520.3.1	ATCSLD4, CSLD4,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Solyc08g082660.2.1	ATCSLG3, CSLG3,...	Cellulose synthase-like protein G3 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Spa_g22180	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Spa_g26805	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Spa_g49131	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Tin_g41125	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Zm00001e002486_P001	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Zm00001e004740_P001	ATCSLD3, KJK,...	Probable mixed-linked glucan synthase 7 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Zm00001e009570_P001	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e037015_P002	CSLD1, ATCSLD1,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004556	alpha-amylase activity	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	1	654

External Links

No external refs found!

Spa_g39367 (IXR1, CEV1, CESA3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation