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  5. Spa_g39177

Spa_g39177


Description : not classified & original description: none


Gene families : OG0001839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39177
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Aev_g05974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60584 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0032.g024882 No alias not classified & original description: CDS=1-1860 0.02 OrthoFinder output from all 47 species
Ceric.38G011800.1 Ceric.38G011800 not classified & original description: pacid=50579411... 0.12 OrthoFinder output from all 47 species
Dcu_g33121 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g56379 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g42803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14834 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012654_P001 Zm00001e012654 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR021102 PNGase_A 85 507
No external refs found!