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  5. Spa_g39132

Spa_g39132 (PRA1.B5)


Aliases : PRA1.B5

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39132

Target Alias Description ECC score Gene Family Method Actions
AT1G55640 PRA1.G1 prenylated RAB acceptor 1.G1 0.02 OrthoFinder output from all 47 species
AT2G40380 PRA1.B2 prenylated RAB acceptor 1.B2 0.03 OrthoFinder output from all 47 species
Als_g13344 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15726 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28433.t1 PRA1.B2, Aspi01Gene28433 B-G-class Rab-GDF protein & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene70815.t1 PRA7, PRA1.F2,... B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G073700.1 PRA1.B2, Ceric.15G073700 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G080600.1 PRA1.B5, Ceric.29G080600 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G040500.1 PRA1.B2, Ceric.39G040500 B-G-class Rab-GDF protein & original description:... 0.06 OrthoFinder output from all 47 species
Gb_00593 No alias B-G-class Rab-GDF protein 0.04 OrthoFinder output from all 47 species
Gb_35591 No alias B-G-class Rab-GDF protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g53070.1 PRA1.E, LOC_Os03g53070 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g58410.1 PRA1.E, LOC_Os03g58410 B-G-class Rab-GDF protein 0.04 OrthoFinder output from all 47 species
LOC_Os05g39670.1 PRA1.B2, LOC_Os05g39670 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
MA_79178g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g05618 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g22411 PRA1.E B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014691 PRA1.B2 B-G-class Rab-GDF protein & original description: CDS=1-618 0.03 OrthoFinder output from all 47 species
Sam_g06109 No alias B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012065_P001 PRA1.E, Zm00001e012065 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Zm00001e019411_P001 PRA1.B2, Zm00001e019411 B-G-class Rab-GDF protein 0.06 OrthoFinder output from all 47 species
Zm00001e023951_P001 PRA1.B2, Zm00001e023951 B-G-class Rab-GDF protein 0.05 OrthoFinder output from all 47 species
Zm00001e031897_P001 PRA1.B2, Zm00001e031897 B-G-class Rab-GDF protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 54 192
No external refs found!