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  5. Spa_g39041

Spa_g39041 (AtCRT1a, CRT1a, CRT1)


Aliases : AtCRT1a, CRT1a, CRT1

Description : ER luminal lectin chaperone *(CRT) & original description: none


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39041

Target Alias Description ECC score Gene Family Method Actions
Adi_g007818 CRT1b, AtCRT1b ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106043 CRT1b, AtCRT1b not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106044 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21047 CRT1b, AtCRT1b ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g43238 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g43109 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42737 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g13538 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g18941 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22260 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Smo144212 CRT1b, AtCRT1b Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Solyc04g048900.3.1 AtCRT3, EBS2,... lectin chaperone (CRT) 0.04 OrthoFinder output from all 47 species
Spa_g41337 AtCRT3, EBS2, CRT3, PSL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 21 262
IPR001580 Calret/calnex 264 328
No external refs found!