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  5. Spa_g38879

Spa_g38879


Description : not classified & original description: none


Gene families : OG0000502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g38879
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00064700 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00131p00034410 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g079642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24831.t1 Aspi01Gene24831 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0167.g054472 No alias not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Cba_g05085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01036220001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os04g21340.1 LOC_Os04g21340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g17930.1 LOC_Os11g17930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g18499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_29161g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000743 No alias not classified & original description: CDS=206-1516 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011903 No alias not classified & original description: CDS=1-993 0.03 OrthoFinder output from all 47 species
Zm00001e028557_P002 Zm00001e028557 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR012881 DUF1685 206 257
No external refs found!