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  5. Spa_g38709

Spa_g38709


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g38709

Target Alias Description ECC score Gene Family Method Actions
Adi_g003400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene26210.t1 Aspi01Gene26210 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G013700.1 Ceric.28G013700 not classified & original description: pacid=50569930... 0.04 OrthoFinder output from all 47 species
Dac_g20168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00306 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
LOC_Os06g07770.1 LOC_Os06g07770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g35610.1 LOC_Os07g35610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 94.4) 0.02 OrthoFinder output from all 47 species
Len_g23479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429587g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.8) 0.02 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.04 OrthoFinder output from all 47 species
MA_15917g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g21920.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.4) 0.03 OrthoFinder output from all 47 species
Nbi_g06177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g28263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g005570.4.1 Solyc06g005570 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 81.6) 0.04 OrthoFinder output from all 47 species
Spa_g08117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023900_P003 Zm00001e023900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030859_P001 Zm00001e030859 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e031088_P005 Zm00001e031088 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 98 220
No external refs found!