Zm00001d045379 (GRMZM2G000645)


Aliases : GRMZM2G000645

Description : 31.4 cell.vesicle transport Coatomer, beta' subunit


Gene families : OG_01_0002614 (Gene family) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d045379
Cluster HCCA cluster: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT1G79990 No alias structural molecules 0.12 Gene family
AT3G15980 No alias Coatomer, beta' subunit 0.02 Gene family
Cpa|evm.model.tig00020903.33 No alias 31.4 cell.vesicle transport structural molecules 0.02 Gene family
Cre02.g118500 No alias 31.4 cell.vesicle transport Coatomer, beta' subunit 0.03 Gene family
GSVIVT01017121001 No alias 31.4 cell.vesicle transport Coatomer, beta' subunit 0.09 Gene family
LOC_Os02g11840 Os02g0209100 31.4 cell.vesicle transport Coatomer, beta' subunit 0.03 Gene family
MA_10436968g0010 No alias 31.4 cell.vesicle transport Coatomer, beta' subunit 0.05 Gene family
Solyc03g120270.3.1 Solyc03g120270.3 31.4 cell.vesicle transport Coatomer, beta' subunit 0.06 Gene family
Solyc06g066730.3.1 Solyc06g066730.3 31.4 cell.vesicle transport Coatomer, beta' subunit 0.11 Gene family
Solyc12g043000.2.1 Solyc12g043000.2 31.4 cell.vesicle transport Coatomer, beta' subunit 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan
BP GO:0006886 intracellular protein transport IEA InterProScan
BP GO:0016192 vesicle-mediated transport IEA InterProScan
CC GO:0030117 membrane coat IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 177 215
IPR001680 WD40_repeat 91 127
IPR001680 WD40_repeat 133 171
IPR001680 WD40_repeat 220 256
IPR006692 Coatomer_WD-assoc_reg 319 763
No external refs found!