AMTR_s00099p00124180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.106

Description : RNA biosynthesis.transcriptional activation.PHD finger transcription factor


Gene families : OG_01_0000911 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000911_tree ,
OG_02_0000834 (LandPlants) Phylogenetic Tree(s): OG_02_0000834_tree ,
OG_03_0005496 (SeedPlants) Phylogenetic Tree(s): OG_03_0005496_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00124180
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g12650.1 No alias PHD finger transcription factor 0.02 Archaeplastida
MA_159666g0010 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.04 Archaeplastida
Zm00001e028631_P001 No alias PHD finger transcription factor 0.03 Archaeplastida
AT1G33420 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 LandPlants
LOC_Os11g12650.1 No alias PHD finger transcription factor 0.02 LandPlants
MA_159666g0010 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.04 LandPlants
Zm00001e028631_P001 No alias PHD finger transcription factor 0.03 LandPlants
MA_159666g0010 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 591 637
No external refs found!