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  5. Aev_g22808

Aev_g22808


Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g22808
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00259550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LIM... 0.02 OrthoFinder output from all 47 species
AT3G61230 No alias GATA type zinc finger transcription factor family protein 0.02 OrthoFinder output from all 47 species
Als_g21872 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49721 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06316 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20782 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G010100.1 Ceric.07G010100 LIM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g14000 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03324 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08756 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16712 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16596 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001741 WLIM1 LIM-type transcription factor & original description: CDS=1-612 0.02 OrthoFinder output from all 47 species
Solyc04g077780.3.1 WLIM1, Solyc04g077780 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species
Solyc06g071310.4.1 WLIM1, Solyc06g071310 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Spa_g04561 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018310_P001 WLIM1, Zm00001e018310 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Zm00001e023098_P001 Zm00001e023098 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Zm00001e041310_P001 Zm00001e041310 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 235 290
IPR001781 Znf_LIM 138 193
No external refs found!