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  5. Spa_g38131

Spa_g38131 (VAMP727, ATVAMP727)


Aliases : VAMP727, ATVAMP727

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g38131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00148060 ATVAMP725,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Ala_g01359 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Aob_g01154 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Aob_g27234 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Aop_g11465 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32347.t1 ATVAMP725,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Ceric.27G008700.1 VAMP727,... R-type VAMP7-group component of SNARE longin membrane... 0.05 OrthoFinder output from all 47 species
Dac_g30964 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.05 OrthoFinder output from all 47 species
Len_g05152 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Len_g16045 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Len_g48885 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Lfl_g05232 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
MA_945343g0010 VAMP726, ATVAMP726 VAMP7-type R-type SNARE longin protein 0.01 OrthoFinder output from all 47 species
Mp7g07410.1 ATVAMP721,... VAMP7-type R-type SNARE longin protein 0.02 OrthoFinder output from all 47 species
Mp8g09990.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Msp_g07629 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Ore_g05656 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001719 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Solyc02g069150.3.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 OrthoFinder output from all 47 species
Zm00001e003924_P002 VAMP727,... VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 88 155
IPR042855 V_SNARE_CC 199 285
No external refs found!