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  5. Spa_g38094

Spa_g38094 (TPR16)


Aliases : TPR16

Description : not classified & original description: none


Gene families : OG0001935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g38094
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Adi_g087246 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04505 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02947 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32058 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g31062.1 TPR16, LOC_Os05g31062 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g05014 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35893 TPR16 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g39794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02425 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026765_P001 Zm00001e026765 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031378_P001 TPR16, Zm00001e031378 TPR repeat-containing thioredoxin TTL2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 1722 1805
No external refs found!