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  5. Spa_g37988

Spa_g37988


Description : not classified & original description: none


Gene families : OG0000372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g37988
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Adi_g109503 RBOHAP108,... NADPH-oxidase *(Rboh) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08328 RBOHAP108,... NADPH-oxidase *(Rboh) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014350001 RBOHD, ATRBOHD Redox homeostasis.reactive oxygen generation.Rboh NADPH-oxidase 0.02 OrthoFinder output from all 47 species
Lfl_g29737 RBOHAP108,... NADPH-oxidase *(Rboh) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43285 RBOHAP108,... respiratory burst NADPH oxidase *(SGN4) & original... 0.03 OrthoFinder output from all 47 species
Pir_g32616 RBOHAP108,... respiratory burst NADPH oxidase *(SGN4) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025060 RBOHAP108,... NADPH-oxidase *(Rboh) & original description: CDS=1-2493 0.02 OrthoFinder output from all 47 species
Smo81185 RBOHAP108,... Redox homeostasis.reactive oxygen generation.Rboh NADPH-oxidase 0.03 OrthoFinder output from all 47 species
Solyc06g068680.3.1 RBOHD, ATRBOHD,... NADPH-oxidase (Rboh) 0.03 OrthoFinder output from all 47 species
Solyc06g075570.2.1 Solyc06g075570 NADPH-oxidase (Rboh) 0.03 OrthoFinder output from all 47 species
Zm00001e011182_P001 RBOHD, ATRBOHD,... Respiratory burst oxidase homolog protein B OS=Solanum... 0.03 OrthoFinder output from all 47 species
Zm00001e011183_P001 RBOHC, RHD2,... Respiratory burst oxidase homolog protein C... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR013121 Fe_red_NAD-bd_6 5 96
No external refs found!