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  5. Spa_g37331

Spa_g37331 (ATLUP2, LUP2)


Aliases : ATLUP2, LUP2

Description : squalene-hopene cyclase & original description: none


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g37331
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36059.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36061.t1 Aspi01Gene36061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045523 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2274 0.03 OrthoFinder output from all 47 species
Msp_g35133 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42306 No alias EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g34152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 44 383
No external refs found!