- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g37194 | |
| Cluster | HCCA: Cluster_132 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00055p00138540 | LOP1, TRN1,... | Protein TORNADO 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g14310 | LOP1, TRN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene26671.t1 | LOP1, TRN1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33295.t1 | LOP1, TRN1,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030849 | No alias | not classified & original description: CDS=1-2208 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G016000.1 | Ceric.18G016000 | not classified & original description: pacid=50622446... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G016100.1 | LOP1, TRN1,... | not classified & original description: pacid=50621243... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.18G016400.1 | Ceric.18G016400 | not classified & original description: pacid=50620952... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G016500.1 | Ceric.18G016500 | not classified & original description: pacid=50621773... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G043500.1 | LOP1, TRN1,... | not classified & original description: pacid=50566189... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05214 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08108 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11503 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g14002 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14064 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09777 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20985 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| MF | GO:0008061 | chitin binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |