Pp3c16_19170V3.1


Description : AGAMOUS-like 61


Gene families : OG_01_0000011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000011_tree ,
OG_02_0000008 (LandPlants) Phylogenetic Tree(s): OG_02_0000008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_19170V3.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00217560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00001p00218870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00047p00181740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00071p00198970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00140p00045380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT1G72350 No alias MADS-box transcription factor family protein 0.01 Archaeplastida
AT1G77950 AGL67 AGAMOUS-like 67 0.03 Archaeplastida
AT2G22540 SVP, AGL22 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT2G45650 AGL6 AGAMOUS-like 6 0.04 Archaeplastida
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT3G30260 AGL79 AGAMOUS-like 79 0.02 Archaeplastida
AT3G54340 AP3, ATAP3 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT4G11880 AGL14 AGAMOUS-like 14 0.02 Archaeplastida
AT5G15800 AGL2, SEP1 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
GSVIVT01000175001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01008139001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01009815001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01010221001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01012110001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01012250001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01018450001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01022182001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
GSVIVT01025945001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01026207001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01027577001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01033253001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01035477001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01038474001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
Gb_16301 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_28337 No alias MADS-box transcription factor 6 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_31417 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os01g66290.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os03g08754.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os03g11614.1 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
LOC_Os03g54170.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os04g52410.2 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os05g34940.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os06g23980.1 No alias MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os09g32948.1 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
LOC_Os12g10540.3 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_10432817g0010 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
MA_16629g0010 No alias transcription factor (MADS/AGL) 0.01 Archaeplastida
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_5917g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_6279308g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_6544g0010 No alias Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.03 Archaeplastida
MA_9841429g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Pp3c17_5920V3.1 No alias K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
Pp3c9_1370V3.1 No alias AGAMOUS-like 66 0.02 Archaeplastida
Smo121275 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Smo5960 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
Smo85851 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
Solyc01g080785.1.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc01g093960.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc01g106710.1.1 No alias component MED19 of head module of MEDIATOR transcription... 0.03 Archaeplastida
Solyc02g065730.2.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc02g084630.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc02g089210.4.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc02g091550.2.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc03g114830.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc04g005320.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc04g078300.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc04g081000.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc05g015750.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc08g067230.4.1 No alias No annotation 0.02 Archaeplastida
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc11g032100.2.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc12g038510.2.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc12g056460.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e003667_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e003670_P002 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e005708_P002 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e012024_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e016529_P004 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e023236_P005 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e026007_P004 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030373_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e031267_P003 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e034629_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e039774_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
AT1G72350 No alias MADS-box transcription factor family protein 0.01 LandPlants
AT1G77950 AGL67 AGAMOUS-like 67 0.02 LandPlants
AT2G45650 AGL6 AGAMOUS-like 6 0.01 LandPlants
AT3G30260 AGL79 AGAMOUS-like 79 0.02 LandPlants
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.01 LandPlants
AT5G13790 AGL15 AGAMOUS-like 15 0.01 LandPlants
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.01 LandPlants
GSVIVT01000175001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01008139001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01008980001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 LandPlants
GSVIVT01012250001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 LandPlants
GSVIVT01018450001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01021534001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 LandPlants
GSVIVT01022182001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01027577001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
Gb_31417 No alias transcription factor (MADS/AGL) 0.01 LandPlants
LOC_Os03g54170.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os04g23910.1 No alias transcription factor (MADS/AGL) 0.01 LandPlants
MA_10432817g0010 No alias transcription factor (MADS/AGL) 0.01 LandPlants
MA_276701g0010 No alias transcription factor (MADS/AGL) 0.01 LandPlants
MA_333471g0010 No alias transcription factor (MADS/AGL) 0.01 LandPlants
MA_6544g0010 No alias Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.02 LandPlants
Smo5961 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 LandPlants
Smo69980 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 LandPlants
Smo85851 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
Solyc01g106710.1.1 No alias component MED19 of head module of MEDIATOR transcription... 0.01 LandPlants
Solyc02g091550.2.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Solyc04g078300.3.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc05g015750.3.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Zm00001e003667_P001 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Zm00001e026007_P004 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e031267_P003 No alias transcription factor (MADS/AGL) 0.01 LandPlants
Zm00001e032487_P001 No alias transcription factor (MADS/AGL) 0.01 LandPlants
Zm00001e034629_P001 No alias transcription factor (MADS/AGL) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!