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  5. Spa_g37100

Spa_g37100 (LRX2)


Aliases : LRX2

Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g37100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.03 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.1 OrthoFinder output from all 47 species
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 OrthoFinder output from all 47 species
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
Aev_g37061 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03898 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04968 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21090 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33154.t1 Aspi01Gene33154 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.04 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14310 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G022500.1 Ceric.16G022500 LRR-domain extensin & original description:... 0.12 OrthoFinder output from all 47 species
Ceric.25G069300.1 LRX2, Ceric.25G069300 LRR-domain extensin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.32G025000.1 Ceric.32G025000 LRR-domain extensin & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15033 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31890 LRX2 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Gb_10910 LRX2 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Gb_29819 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.09 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07695 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39205 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.03 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc01g107790.2.1 Solyc01g107790 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g006973.1.1 Solyc12g006973 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Spa_g09054 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005974_P001 Zm00001e005974 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e007641_P001 Zm00001e007641 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 165 218
IPR013210 LRR_N_plant-typ 92 125
No external refs found!