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  5. Spa_g35528

Spa_g35528 (RPL27AB, RPL27A)


Aliases : RPL27AB, RPL27A

Description : component *(uL15) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g35528
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Ala_g05509 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g19375 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cre02.g115200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os07g42170.1 RPL27AB, RPL27A,... component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Lfl_g25920 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_10436259g0020 No alias component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g15440.1 No alias component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c16_22430V3.1 Pp3c16_22430 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g23378 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g25695 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc03g112360.1.1 Solyc03g112360 component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030245 cellulose catabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051275 beta-glucan catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 30 146
No external refs found!