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  5. Spa_g35500

Spa_g35500


Description : component *(eS25) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g35500
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00198170 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT4G39200 No alias Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Adi_g107428 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Adi_g124135 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g25430 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39540.1 LOC_Os09g39540 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
MA_104137g0010 No alias component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_10430279g0010 No alias component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
Sam_g20177 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g30236 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g31087 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g42051 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g35986 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g42651 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g43310 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e028930_P001 Zm00001e028930 component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 10 105
No external refs found!