Zm00001d044899 (GRMZM5G814279)


Aliases : GRMZM5G814279

Description : No description available


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d044899
Cluster HCCA cluster: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.02 Gene family
AT1G26310 AGL10, CAL1, CAL K-box region and MADS-box transcription factor family protein 0.02 Gene family
AT2G24840 AGL61, DIA AGAMOUS-like 61 0.02 Gene family
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.03 Gene family
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.02 Gene family
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.03 Gene family
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.04 Gene family
AT4G24540 AGL24 AGAMOUS-like 24 0.03 Gene family
AT5G15800 AGL2, SEP1 K-box region and MADS-box transcription factor family protein 0.04 Gene family
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.02 Gene family
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.06 Gene family
AT5G62165 AGL42 AGAMOUS-like 42 0.02 Gene family
GSVIVT01008139001 No alias 33.99 development.unspecified Encodes a MADS box... 0.02 Gene family
GSVIVT01008140001 No alias 33.99 development.unspecified MADS box gene negatively... 0.04 Gene family
GSVIVT01008560001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
GSVIVT01009171001 No alias 33.99 development.unspecified Encodes a nuclear protein... 0.03 Gene family
GSVIVT01012110001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01019883001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.06 Gene family
GSVIVT01025945001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01026207001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os03g08754 Os03g0186600 33.99 development.unspecified Encodes a nuclear protein... 0.03 Gene family
LOC_Os03g11614 Os03g0215400 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
LOC_Os03g54170 Os03g0753100 33.99 development.unspecified Encodes a MADS box... 0.02 Gene family
LOC_Os05g11414 Os05g0203800 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os09g02780 Os09g0116000 No description available 0.02 Gene family
MA_211156g0010 No alias 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Solyc00g179240.2.1 Solyc00g179240.2 No description available 0.02 Gene family
Solyc01g093960.3.1 Solyc01g093960.3 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc01g106730.2.1 Solyc01g106730.2 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc02g091550.2.1 Solyc02g091550.2 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc03g114830.3.1 Solyc03g114830.3 33.99 development.unspecified MADS box gene negatively... 0.03 Gene family
Solyc04g076280.3.1 Solyc04g076280.3 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family
Solyc06g064840.3.1 Solyc06g064840.3 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Solyc10g017630.2.1 Solyc10g017630.2 No description available 0.02 Gene family
Solyc11g010570.2.1 Solyc11g010570.2 33.99 development.unspecified Encodes a nuclear protein... 0.03 Gene family
Solyc12g038510.2.1 Solyc12g038510.2 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d007949 GRMZM2G148693 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
Zm00001d013259 GRMZM2G553379 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
Zm00001d031620 GRMZM2G159397 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d044850 GRMZM2G152415 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Zm00001d048474 GRMZM2G171365 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!