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5. Ppi_g11986

Ppi_g11986 

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1. Home
2. Species
3. Stenochlaena palustris
4. Sequence
5. Spa_g34311

Spa_g34311

Description : component *(eL32) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)

Expression Profile

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Co-expression Networks

Type	Description	Actions
Neighborhood	HRR: Spa_g34311

Expression Context Conservation (ECC)

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G46430	No alias	Ribosomal protein L32e	0.02	OrthoFinder output from all 47 species
Adi_g018846	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ala_g32062	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Als_g10549	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Als_g25003	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Als_g31659	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aop_g00898	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Aop_g13748	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Aop_g20751	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aspi01Gene22038.t1	Aspi01Gene22038	component *(eL32) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Azfi_s0061.g035078	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Ceric.22G081000.1	Ceric.22G081000	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cre06.g289550	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dcu_g24494	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g35080	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
GSVIVT01021377001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Gb_36437	No alias	component RPL32 of LSU proteome component	0.03	OrthoFinder output from all 47 species
LOC_Os08g41300.1	LOC_Os08g41300	component RPL32 of LSU proteome component	0.02	OrthoFinder output from all 47 species
LOC_Os09g32500.1	LOC_Os09g32500	component RPL32 of LSU proteome component	0.01	OrthoFinder output from all 47 species
LOC_Os09g32532.1	LOC_Os09g32532	component RPL32 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Lfl_g14525	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Lfl_g21979	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.14	OrthoFinder output from all 47 species
Mp7g12480.1	No alias	component RPL32 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Nbi_g45103	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pir_g13764	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pir_g55034	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pir_g61740	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Pnu_g25464	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c2_9590V3.1	Pp3c2_9590	Ribosomal protein L32e	0.01	OrthoFinder output from all 47 species
Ppi_g47089	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Sam_g12910	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g26800	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g47289	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Smo146656	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
Solyc08g006900.3.1	Solyc08g006900	component RPL32 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Spa_g17123	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Tin_g17904	No alias	component *(eL32) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 47 species
Zm00001e003623_P002	Zm00001e003623	component RPL32 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Zm00001e021938_P001	Zm00001e021938	component RPL32 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e034606_P001	Zm00001e034606	component RPL32 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Functional Annotation

• GO
• Predicted GO
• InterPro

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001515	Ribosomal_L32e	16	123

External Links

No external refs found!