AMTR_s00099p00085080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.64

Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana


Gene families : OG_01_0005140 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005140_tree ,
OG_02_0004209 (LandPlants) Phylogenetic Tree(s): OG_02_0004209_tree ,
OG_03_0006102 (SeedPlants) Phylogenetic Tree(s): OG_03_0006102_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00085080
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Pp3c13_13860V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 Archaeplastida
Solyc02g090910.3.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 LandPlants
Solyc02g090910.3.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 SeedPlants
Zm00001e018673_P002 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 9 75
IPR000504 RRM_dom 377 437
IPR000504 RRM_dom 263 329
IPR000504 RRM_dom 96 157
No external refs found!