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  5. Spa_g33680

Spa_g33680


Description : not classified & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g33680
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Adi_g071501 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g46335 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021318.73 UBQ10 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Lfl_g16683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23474 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c20_23170V3.1 Pp3c20_23170 ubiquitin extension protein 1 0.01 OrthoFinder output from all 47 species
Ppi_g21095 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000965_P001 Zm00001e000965 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e034164_P001 RUB1, ATRUB1,... ubiquitin-fold protein (RUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002653 Znf_A20 80 103
IPR000626 Ubiquitin-like_dom 1 68
IPR000058 Znf_AN1 166 205
No external refs found!