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  5. Spa_g33463

Spa_g33463


Description : not classified & original description: none


Gene families : OG0009040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g33463

Target Alias Description ECC score Gene Family Method Actions
AT1G06923 No alias BEST Arabidopsis thaliana protein match is: ovate family... 0.06 OrthoFinder output from all 47 species
AT1G15260 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT3G24535 No alias unknown protein; Has 28 Blast hits to 27 proteins in 8... 0.05 OrthoFinder output from all 47 species
Ceric.06G068300.1 Ceric.06G068300 not classified & original description: pacid=50620133... 0.05 OrthoFinder output from all 47 species
LOC_Os05g26210.1 ATOFP17, OFP17,... no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os07g48140.1 ATOFP17, OFP17,... Transcription repressor OFP17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10667g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g090870.1.1 ATOFP17, OFP17,... Transcription repressor OFP17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g082450.1.1 ATOFP17, OFP17,... Transcription repressor OFP17 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!