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  5. Spa_g33020

Spa_g33020


Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g33020
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.03 OrthoFinder output from all 47 species
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
Adi_g080109 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085610 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43377 LRX2 component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Als_g04968 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13705 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g61610 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09207.t1 Aspi01Gene09207 LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g14018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G053400.1 Ceric.15G053400 not classified & original description: pacid=50640042... 0.03 OrthoFinder output from all 47 species
Ceric.24G073600.1 LRX2, Ceric.24G073600 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15319 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04566 LRX2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
MA_179279g0010 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Msp_g07695 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05430 LRX2 LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50524 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.05 OrthoFinder output from all 47 species
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc01g107790.2.1 Solyc01g107790 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g006973.1.1 Solyc12g006973 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Spa_g05733 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g13067 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e022985_P003 Zm00001e022985 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.03 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 210 268
No external refs found!