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  5. Spa_g31162

Spa_g31162


Description : not classified & original description: none


Gene families : OG0000797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g31162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00109520 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g21081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G120600.1 Ceric.01G120600 not classified & original description: pacid=50592969... 0.09 OrthoFinder output from all 47 species
Ceric.17G025600.1 Ceric.17G025600 not classified & original description: pacid=50618595... 0.09 OrthoFinder output from all 47 species
Ceric.21G063200.1 Ceric.21G063200 not classified & original description: pacid=50603116... 0.03 OrthoFinder output from all 47 species
GSVIVT01021200001 No alias U-box domain-containing protein 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032397001 No alias U-box domain-containing protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os05g49810.1 LOC_Os05g49810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g08815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_5118g0020 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g01973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g09987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014762 No alias not classified & original description: CDS=762-1922 0.03 OrthoFinder output from all 47 species
Sam_g31874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g043700.3.1 Solyc03g043700 U-box domain-containing protein 4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Spa_g03328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017096_P001 Zm00001e017096 U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 147 182
IPR000225 Armadillo 185 223
No external refs found!