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  5. Spa_g30460

Spa_g30460


Description : component *(DDR) of ISWI chromatin remodeling complex & original description: none


Gene families : OG0002395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002395_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30460
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035750001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_41656 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_41657 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g01784 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
Solyc08g068050.3.1 Solyc08g068050 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e016677_P001 Zm00001e016677 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR018501 DDT_dom 41 86
No external refs found!