1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g30454

Spa_g30454


Description : not classified & original description: none


Gene families : OG0003097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003097_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30454
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00117690 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Aev_g04608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33906 G-TMT, VTE4, TMT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01313 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36253 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.15G001900.1 Ceric.15G001900 not classified & original description: pacid=50639670... 0.05 OrthoFinder output from all 47 species
Cre06.g259401 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g50125 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020686001 G-TMT, VTE4, TMT1 No description available 0.05 OrthoFinder output from all 47 species
LOC_Os10g10180.1 G-TMT, VTE4,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430392g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g01531 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g19529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03041 G-TMT, VTE4, TMT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000952 No alias not classified & original description: CDS=390-1673 0.03 OrthoFinder output from all 47 species
Sam_g14377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo90177 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc10g008020.3.1 Solyc10g008020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012884_P003 G-TMT, VTE4,... no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 191 293
No external refs found!