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  5. Spa_g30427

Spa_g30427 (ATPUB45, PUB45)


Aliases : ATPUB45, PUB45

Description : E3 ubiquitin ligase & original description: none


Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30427

Target Alias Description ECC score Gene Family Method Actions
AT1G24330 No alias ARM repeat superfamily protein 0.01 OrthoFinder output from all 47 species
Als_g27084 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62287 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G047000.1 ATPUB45, PUB45,... E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g07545 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18855 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010374001 No alias U-box domain-containing protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g04138 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10053 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02310 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10644 ATPUB45, PUB45 E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 290 360
IPR000225 Armadillo 565 603
No external refs found!