1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g30245

Spa_g30245


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00126340 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT3G47550 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g000670 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008851 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050586 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074839 No alias E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04464 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01768 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23685 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00271.t1 Aspi01Gene00271 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41197.t2 Aspi01Gene41197 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05081 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G021200.1 Ceric.23G021200 E3 ubiquitin ligase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g09799 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02665 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17220 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22283 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22842 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.09 OrthoFinder output from all 47 species
Gb_12336 No alias RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_37740 No alias RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os01g49280.1 LOC_Os01g49280 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os11g38800.1 LOC_Os11g38800 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g08617 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g21354 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09753 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10536 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02371 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23717 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g51830 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09771 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000908 No alias E3 ubiquitin ligase & original description: CDS=1-1032 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019260 No alias E3 ubiquitin ligase & original description: CDS=708-1604 0.02 OrthoFinder output from all 47 species
Sam_g50720 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Smo420592 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc01g079530.4.1 Solyc01g079530 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc04g007600.4.1 Solyc04g007600 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc06g069780.4.1 Solyc06g069780 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Spa_g40447 No alias E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g37701 No alias E3 ubiquiTin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017493_P001 Zm00001e017493 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Zm00001e021220_P001 Zm00001e021220 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 106 151
IPR022143 DUF3675 158 270
No external refs found!