Zm00001d044336 (GRMZM2G019874)


Aliases : GRMZM2G019874

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0009885 (Gene family) Phylogenetic Tree(s): OG0009885_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d044336
Cluster HCCA cluster: Cluster_341

Target Alias Description ECC score Gene Family Method Actions
AT5G09950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 Gene family
GSVIVT01030080001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
LOC_Os01g40720 Os01g0589900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 419 442
IPR002885 Pentatricopeptide_repeat 823 847
IPR002885 Pentatricopeptide_repeat 314 339
IPR002885 Pentatricopeptide_repeat 622 646
IPR002885 Pentatricopeptide_repeat 447 475
IPR002885 Pentatricopeptide_repeat 750 797
IPR002885 Pentatricopeptide_repeat 126 175
IPR002885 Pentatricopeptide_repeat 234 283
IPR002885 Pentatricopeptide_repeat 649 696
IPR032867 DYW_dom 926 1048
No external refs found!