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  5. Aev_g21981

Aev_g21981 (SDG30, ATX2)


Aliases : SDG30, ATX2

Description : not classified & original description: none


Gene families : OG0006147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g21981

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00150780 ATX1, SDG27,... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Ala_g37430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59370 ATX3, SDG14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11062.t1 Aspi01Gene11062 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0215.g058370 SDG30, ATX2 not classified & original description: CDS=559-6048 0.02 OrthoFinder output from all 47 species
Dcu_g37518 SDG30, ATX2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_26322 SET29, SDG29, ATX5 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Len_g49218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g26800.1 SDG30, ATX2 Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ppi_g29454 ATX1, SDG27 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo424372 No alias Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 2197 2304
IPR032308 TDBD 286 331
No external refs found!