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  5. Spa_g30114

Spa_g30114


Description : not classified & original description: none


Gene families : OG0010123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30114

Target Alias Description ECC score Gene Family Method Actions
Adi_g079616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40985.t1 Aspi01Gene40985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009691 No alias not classified & original description: CDS=89-2044 0.06 OrthoFinder output from all 47 species
Ceric.39G013000.1 Ceric.39G013000 not classified & original description: pacid=50583026... 0.04 OrthoFinder output from all 47 species
Dac_g16601 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g09965 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g15404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 389 433
IPR002885 Pentatricopeptide_repeat 562 583
IPR002885 Pentatricopeptide_repeat 362 386
IPR002885 Pentatricopeptide_repeat 287 312
IPR002885 Pentatricopeptide_repeat 462 486
IPR002885 Pentatricopeptide_repeat 591 619
No external refs found!