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  5. Spa_g30019

Spa_g30019 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30019

Target Alias Description ECC score Gene Family Method Actions
Als_g10971 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G013800.1 CAMTA3, SR1,... CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g10015 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017670001 CAMTA3, SR1 RNA biosynthesis.transcriptional activation.CAMTA... 0.03 OrthoFinder output from all 47 species
Gb_11889 CAMTA3, SR1 transcription factor (CAMTA) 0.04 OrthoFinder output from all 47 species
LOC_Os04g31900.1 LOC_Os04g31900 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Len_g16770 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013495 No alias CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g07183 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008367_P002 Zm00001e008367 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002909 IPT_dom 564 644
IPR000048 IQ_motif_EF-hand-BS 1001 1020
IPR000048 IQ_motif_EF-hand-BS 979 996
IPR005559 CG-1_dom 23 135
No external refs found!