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  5. Spa_g29997

Spa_g29997 (PEN3, ABCG36, ATPDR8,...)


Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8

Description : not classified & original description: none


Gene families : OG0008801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008801_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29997
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Aop_g03592 PDR11, ATPDR11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09538 PDR6, ATPDR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43225 PDR4, ATPDR4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43629 PDR11, ATPDR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36593 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15997 PDR6, ATPDR6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16382 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_10260477g0010 PDR1, ATPDR1 ABC transporter G family member 36 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_134489g0020 PDR1, ATPDR1 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_268957g0010 ABCG40, PDR12,... ABC transporter G family member 39 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_525120g0010 ATPDR3, PDR3 ABC transporter G family member 51 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Ore_g07010 PDR6, ATPDR6 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR013581 PDR_assoc 2 27
No external refs found!