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  5. Spa_g29992

Spa_g29992 (RIN4)


Aliases : RIN4

Description : regulatory factor *(RIN4) guarded by RPM1/RPS2 activities & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29992
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Als_g02908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60879.t1 RIN4, Aspi01Gene60879 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G062300.1 Ceric.22G062300 not classified & original description: pacid=50614018... 0.04 OrthoFinder output from all 47 species
Dac_g00510 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Ehy_g10233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25971 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Msp_g26518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 182 217
IPR008700 TypeIII_avirulence_cleave 5 34
No external refs found!