Spa_g29968


Description : methyltransferase *(CGR) & original description: none


Gene families : OG0003308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003308_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29968
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00066590 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.03 OrthoFinder output from all 47 species
AT5G65810 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Aev_g13188 No alias methyltransferase *(CGR) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g49365 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13025 No alias methyltransferase *(CGR) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g01313 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03748 No alias methyltransferase *(CGR) & original description: none 0.13 OrthoFinder output from all 47 species
Aop_g36285 No alias methyltransferase *(CGR) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g11074 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08659 No alias methyltransferase *(CGR) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g23120 No alias methyltransferase *(CGR) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g11903 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29082 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02321 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12645 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12646 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002452001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01002531001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.07 OrthoFinder output from all 47 species
GSVIVT01009285001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01036990001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.08 OrthoFinder output from all 47 species
Gb_13505 No alias methyltransferase (CGR) 0.05 OrthoFinder output from all 47 species
LOC_Os01g05070.1 LOC_Os01g05070 methyltransferase (CGR) 0.05 OrthoFinder output from all 47 species
Lfl_g38069 No alias methyltransferase *(CGR) & original description: none 0.08 OrthoFinder output from all 47 species
Mp2g15640.1 No alias methyltransferase (CGR) 0.01 OrthoFinder output from all 47 species
Msp_g11097 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38644 No alias methyltransferase *(CGR) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07884 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43608 No alias methyltransferase *(CGR) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02740 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05028 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30091 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Smo402173 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.02 OrthoFinder output from all 47 species
Solyc02g092000.3.1 Solyc02g092000 methyltransferase (CGR) 0.05 OrthoFinder output from all 47 species
Tin_g03175 No alias methyltransferase *(CGR) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e016930_P001 Zm00001e016930 methyltransferase (CGR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!