Spa_g29956 (IXR1, CEV1, CESA3,...)

Aliases : IXR1, CEV1, CESA3, ATCESA3, ATH-B

Description : not classified & original description: none

Gene families : OG0008229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008229_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g29956
Cluster	HCCA: Cluster_211

Target	Alias	Description	ECC score	Gene Family Method
Adi_g024527	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g048672	IXR1, CEV1,...	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Adi_g050025	MUR10, ATCESA7,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g065409	CESA4, NWS2, IRX5	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Adi_g080987	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g080988	MUR10, ATCESA7,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g102733	IXR1, CEV1,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g102734	IXR1, CEV1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g33288	IXR1, CEV1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g06204	MUR10, ATCESA7,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g33746	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g34263	MUR10, ATCESA7,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g42194	ATCSLD3, KJK, CSLD3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g34695	IXR1, CEV1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g24446	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	1	218

External Links

No external refs found!

Spa_g29956 (IXR1, CEV1, CESA3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation