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  5. Spa_g29928

Spa_g29928


Description : RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) & original description: none


Gene families : OG0002116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29928

Target Alias Description ECC score Gene Family Method Actions
Aob_g07229 GDI2, ATGDI2 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Cba_g12737 No alias RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Dcu_g06290 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Gb_32105 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.02 OrthoFinder output from all 47 species
LOC_Os05g23860.1 ATGDI1, AT-GDI1,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.02 OrthoFinder output from all 47 species
LOC_Os05g34540.1 ATGDI1, AT-GDI1,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.03 OrthoFinder output from all 47 species
Len_g09591 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Lfl_g06971 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Mp6g05010.1 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.03 OrthoFinder output from all 47 species
Msp_g10692 No alias RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Nbi_g21880 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.03 OrthoFinder output from all 47 species
Pir_g02243 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.02 OrthoFinder output from all 47 species
Smo271917 ATGDI1, AT-GDI1, GDI1 Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
Solyc08g015860.3.1 GDI2, ATGDI2,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.04 OrthoFinder output from all 47 species
Tin_g12403 ATGDI1, AT-GDI1, GDI1 RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &... 0.04 OrthoFinder output from all 47 species
Zm00001e031685_P005 ATGDI1, AT-GDI1,... RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018203 GDP_dissociation_inhibitor 1 433
No external refs found!