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  5. Spa_g29900

Spa_g29900 (LOB)


Aliases : LOB

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29900

Target Alias Description ECC score Gene Family Method Actions
AT3G27650 LBD25 LOB domain-containing protein 25 0.04 OrthoFinder output from all 47 species
Aspi01Gene43918.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G082500.1 LOB, Ceric.01G082500 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01007677001 LOB RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01013631001 LBD4 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
Nbi_g00674 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08077 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35955 LBD20 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42314 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01746 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g044520.2.1 LBD11, Solyc01g044520 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc02g086480.1.1 LOB, Solyc02g086480 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc09g066260.4.1 LBD16, ASL18,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e042449_P001 Zm00001e042449 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004883 LOB 14 111
No external refs found!