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  5. Spa_g29506

Spa_g29506 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : not classified & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29506

Target Alias Description ECC score Gene Family Method Actions
AT1G51460 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Dac_g31188 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36998 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09105 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34149 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g21500 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002792 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=1-2232 0.04 OrthoFinder output from all 47 species
Solyc01g105387.1.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 117 322
No external refs found!