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  4. Sequence
  5. Spa_g29448

Spa_g29448


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29448

Target Alias Description ECC score Gene Family Method Actions
AT3G27090 No alias DCD (Development and Cell Death) domain protein 0.03 OrthoFinder output from all 47 species
Adi_g007222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
Len_g27414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_12652g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 270.0) 0.02 OrthoFinder output from all 47 species
MA_14999g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.02 OrthoFinder output from all 47 species
Msp_g15112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g008850.3.1 Solyc06g008850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020733_P001 Zm00001e020733 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.03 OrthoFinder output from all 47 species
Zm00001e027710_P001 Zm00001e027710 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 35 166
No external refs found!