Spa_g29272 (TUB1)

Aliases : TUB1

Description : not classified & original description: none

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g29272

Target	Alias	Description	ECC score	Gene Family Method
AT1G20010	TUB5	tubulin beta-5 chain	0.02	OrthoFinder output from all 47 species
Ala_g09682	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Aop_g25845	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Aspi01Gene15212.t1	TUB6, Aspi01Gene15212	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Aspi01Gene56038.t1	TUB7, Aspi01Gene56038	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene61960.t1	TUB1, Aspi01Gene61960	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene61960.t2	TUB7, Aspi01Gene61960	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g29388	TUB5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_28103	TUB6	Tubulin beta chain OS=Volvox carteri...	0.03	OrthoFinder output from all 47 species
Len_g17984	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Len_g45588	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ppi_g05536	TUB8	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g32510	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003008	Tubulin_FtsZ_GTPase	3	137

External Links

No external refs found!