1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g29208

Spa_g29208 (APRR7, PRR7)


Aliases : APRR7, PRR7

Description : circadian clock time-of-day-dependent expressed repressor *(PRR) & original description: none


Gene families : OG0001140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001140_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29208

Target Alias Description ECC score Gene Family Method Actions
Adi_g107970 APRR7, PRR7 circAdian clock time-of-day-dependent expressed... 0.02 OrthoFinder output from all 47 species
Ala_g04632 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
Als_g12954 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
Aspi01Gene40465.t2 PRR3, APRR3,... circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
LOC_Os09g36220.1 APRR5, PRR5,... PRR circadian clock time-of-day-dependent expressed repressor 0.02 OrthoFinder output from all 47 species
Len_g29866 PRR3, APRR3 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
Len_g54722 APRR7, PRR7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13591 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 36 147
IPR010402 CCT_domain 629 671
No external refs found!