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Aliases : AGL21
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g29118 | |
| Cluster | HCCA: Cluster_29 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00047p00190220 | AGL4, SEP2,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00109p00015260 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G24260 | AGL9, SEP3 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G26310 | AGL10, CAL1, CAL | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G11880 | AGL14 | AGAMOUS-like 14 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G60910 | AGL8, FUL | AGAMOUS-like 8 | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene17593.t1 | AGL104, Aspi01Gene17593 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17826.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44619.t1 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54037.t3 | Aspi01Gene54037 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene62317.t1 | ANR1, AGL44,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s2186.g109823 | No alias | not classified & original description: CDS=5-496 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G082300.1 | AGL28, Ceric.04G082300 | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.08G048300.1 | AGL42, Ceric.08G048300 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G048600.1 | AGL10, CAL1,... | not classified & original description: pacid=50638045... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G042700.1 | AGL7, AP1,... | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G057900.1 | STK, AGL11,... | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g13201 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14605 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g17972 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07325 | AGL8, FUL | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29512 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01003864001 | AGL16 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006592001 | AGL61, DIA | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009393001 | AGL104 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01010221001 | AGL62 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012249001 | AGL2, SEP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012250001 | AGL7, AP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018450001 | AGL6 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033253001 | AGL15 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_03068 | AGL16 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g10504.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g07430.1 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g45770.1 | AGL6, LOC_Os02g45770 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g52410.2 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g06750.1 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g23980.1 | AGL16, LOC_Os06g23980 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g01820.1 | AGL7, AP1, LOC_Os07g01820 | transcription factor (MADS/AGL) | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g08300 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40583 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_15122g0010 | AGL16 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_2986g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_9544285g0010 | AGL42 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10184 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g51490 | AGL24 | regulatory protein *(SVP/AGL24) of floral meristem... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g54533 | MAF2, AGL31 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30733 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g61789 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002217 | AGL15 | MADS/AGL-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g13249 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36311 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50341 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g078300.3.1 | AGL104, Solyc04g078300 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g056460.3.1 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g27559 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28519 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005708_P002 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006950_P001 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013738_P001 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023236_P005 | AGL6, Zm00001e023236 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027034_P001 | PI, Zm00001e027034 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034629_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039774_P001 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |